Graph Compute, Day 5 -- Preparations for exploring computational chemistry
100 Days of learning – Day 5
Our objective in graph compute is all a functional graph that more accuratedly implements atomic or charge density relationships in code … this means working on the application of Density-Functional Perturbation Theory or, more specifically, applying Electron-Phonon Wannier (EPW) in open source gfortran 9 and Message Passing Interface (MPI) code using QUANTUM ESPRESSO.
All models are wrong; some are useful. The point of this is in the recognition that code will necessarily always be an imperfect depiction of reality – the point of developing code is to LEARN where the imperfections are in our understanding and to continually adjust and improve the code.
We will install QUANTUM ESPRESSO and updates from source, which means that need first of all a minimal Unix development workflow environment, which means that we will work with bash [or sh] and utilities like make, awk, sed. For our purposes, we do not need a full blown Linus desktop workstation and apps; instead, we install a Linux distribution (such as Ubuntu, OpenSUSE, Kali, Debian, Arch Linux, and more). Since WSL 2 uses a managed VM and an entirely new architecture that uses a real Linux kernel while maintaining full system call capability [through Windows 11], we rely upon the Windows Subsystem for Linux.